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Samtools is a suite of programs for interacting with high-throughput sequencing data. It consists of three...P and short indel sequence variantsHTSlibA C library for reading/writing high-throughput sequencing data...2672 days ago
Pacbio Long Reads Compatible Software and Tools
...acBio data? Email us. Software categories: De novo assembly Structural Variations Detection Reference-based alignment Consensus and variant calling RNA analysis Epigenetic base modifications and...2672 days ago
- Krona allows hierarchical data to be explored with zooming, multi-layered pie charts. Krona charts can be created using an Excel template or KronaTools, which include...
2665 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
...c assemblies by plotting coverage (sequencing depth) and GC values of contigs, and also to annotate the pl...onomic information. Different sets of annotations, including taxonomic assignments from conserved marker g...2661 days ago
- ...is website and accompaning documents are intended as a tool to help researchers dealing with non-model organisms acquire and process transcriptomic high-throughput sequencing data w...
2654 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long nucleotide sequences produced by next-generation sequencing technologies. The late...2654 days ago
- JSON (JavaScript Object Notation) is a lightweight data-interchange format. It is easy for humans to read and write. It is easy for machines to parse and generate. It is based on...
2652 days ago
- High throughput sequencing (HTS) technologies are being applied to a wide range of important topics in biology. However, the analyses of non-model organisms, for whic...
2651 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...rect sequencing errors in long reads from 3rd generation sequencing with high error rate, and is especiall...usable for detection of region of similarity with other sequences, for aligning them to the contigs of an...2646 days ago
WGS Celera Assembler version 8.3rc2
...xr-x 1 urbe urbe 575K Apr 10 11:41 addReadsToUnitigs-rwxrwxr-x 1 urbe urbe 128K A...rwxr-x 1 urbe urbe 213K Apr 10 11:41 buildRefContigs-rwxrwxr-x 1 urbe urbe 990K A...m-rwxrwxr-x 1 urbe urbe 228K Apr 10 11:41 fixUnitigs-rwxrwxr-x 1 urbe urbe 147K A...2646 days ago
