CABOG: Celera Assembler with Best Overlap Graph
...malian. CABOG is an extension of the Celera Assembler software that was originally developed at Celer...grams do is often described as a scaled up version of a family solving a jigsaw puzzle. The CABOG softwar...2611 days ago
ERGO 2.0 Bioinformatics suites
...genomics to capture, query, and visualize sequenced genomes. Using Igenbio's proprietary algorithms...lection of microbial metabolic and non-metabolic pathways, ERGO™ assigns functions to genes, integra...2610 days ago
NCBI Prokaryotic Genome Annotation Pipeline
NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and archaeal genomes (chromosomes and plasmids). Genome annotation is a multi-level process that inclu...2610 days ago
CAR: Reconstructing Contiguous Regions of an Ancestral Genome
...others. Although only a few mammalian genomes are currently sequenced to high precision, our theoretical a...icate that our results are reasonably accurate and that they will become highly accurate in the foreseeabl...2608 days ago
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GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS is a tool able to merge two or more assemblies in order to improve contiguity and correctness. It can be used on all NGS-based assembly projects and it shows its full potent...2607 days ago
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GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
...RASS offers a mixed-integer programming formulation of the contig scaffolding problem, which combines contig order, distance and orientati...onstrained binary quadratic programming approximation of the original problem. We compared GRAS...2603 days ago