Results for "Genome Sequence"
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GOLD:Genomes Online Database, is a World Wide Web resource for comprehensive access to information regarding genome and metagenome sequencing projects, and their associated metadata, around the world. https://gold.jgi.doe.gov/2533 days ago
Web Apollo: a web-based genomic annotation editing platform
...available on the web. One of the natural consequences following from current adv...are more and more researchers sequencing new genomes. These researchers require t...cribe the functional features of their newly sequenced genomes. With Web Apollo researchers c...2531 days ago
- Typically in comparative genomics, we can identify anchors, chain them into syntenic blocks and interpret th...se blocks as derived from a common descent. However, when comparing two genomes undergone ancient genome d...
2528 days ago
Sequence - Evolution - Function; Computational Approaches in Comparative Genomics
Sequence - Evolution - Function is an introduction to the computational approaches that play a critical role i...the potential and limitations of computational and experimental approaches to genome a...2522 days ago
Meraculous: De Novo Genome Assembly with Short Paired-End Reads
...erived from the 15.4 megabase genome of the haploid yeast Pic...tipitis. More than 95% of the genome is recovered, with no errors; half the assembled sequence is in contigs longer than 1...ospects for assembling larger genomes are discussed.2429 days ago
QuorUM: An Error Corrector for Illumina Reads
...ta can provide high coverage of a genome by relatively short (most oft...in some read at every base in the genome. These errors make handling t...al bases and trimming of unusable sequence. We developed an error corr...ecting actual Illumina reads from genomes for which a reference assembly...2428 days ago
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
We developed a prokaryotic genome annotation pipeline, DFAST, that also supports genome submission to public sequence databases. DFAST was originall...notate a typical-sized bacterial genome within 10 minutes, with rich...signment between given reference genomes. In addition, the modular fram...2422 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
Genomicus is a genome browser that enables users to navigate in genomes in several dimensions: linearly along chromosome axes, t...ll its orthologous and paralogous copies in all the other sequenced metazoan genomes. Moreover, Genomicus stores an...2418 days ago
- DiscoSnp is designed for discovering all kinds of SNPs (not only isolated ones), as well as insertions and deletions, from raw set(s) of reads. The number of input read sets is not constrained, it can be one, two, or more. No reference genome is needed.
2416 days ago
- Chromosomal rearrangement events are caused by abnormal breaking and rejoining of DNA m...llenges, because the structural variations and the genomes are different from one perso...to another. Intermediate comparison via reference genome c...
2416 days ago
