Results for "NT"
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...(HGA) method. The tool will apply: 1. Partitioning a given reads dataset into a given number of partitions...alue of 31). 5. Finaly, re-assembling the whole dataset with the merged contigs or the combined contigs, u...2773 days ago
- ...and codes that analyses Whole Exome Sequencing (WES) data to identify CNVs. EXCAVATOR2 enhances the identification of all genomic CNVs,...a and enlarges the spectrum of detectable CNVs to off-target events.EXCAVATOR2 can be effectivel...
2772 days ago
- ...ching depending on the amplicons types (ITS or 16S). If WGS are chosen, then bipype finds the SA coordinates of the input reads and generates alignments in the SAM format given sing...
2771 days ago
- Latest announcement on DBT India. Calls Events Projects Jobs
2768 days ago
- ...a desktop computer in a day. The output of Minia is a set of contigs. Minia produces results of similar contiguity and accuracy to other d...ries (Source code) (Legacy codebase) For the impatient A typical Minia command line...
2764 days ago
- SGA is a de novo genome assembler based on the concept of string graphs. The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads....
2764 days ago
- ...of the data provided. For subcommands that generate FASTQ data, either a single file or a pair of files will be generated. If no -o argument is provided, single files wil...
2764 days ago
Standardized velvet assembly report
Requirements: velvet (velveth velvetg should be in your PATH...l Optional: BLAT or BLAST (to generate alignments against a reference genome). If using BLAT, add faToTwoBit,gfClient,gfServer to your PATH. If usi...2763 days ago
- ...of velvet, and the process involved in producing a de novo assembly from Illumina reads. http://evomics.org/learning/assembly-and-alignment/velvet/...
2763 days ago
- ...which span across a structrual variant -- SV ) mapping and SV callin...tions with the direction of discordant read pairs. PRISM_CTX is a to...inter-chromosome trans-location events. PRISM and PRISM_CTX we...;file. http://compbio.cs.toronto.edu/prism/
2762 days ago
