Results for "PA"
Bookmarks
...interacting with high-throughput sequencing data. It consists of three separate repositories: SamtoolsRe...data Samtools and BCFtools both use HTSlib internally, but these source packages contain their own copie...2669 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMRT® Analysis suite. All packages are bel...al project sites for up-to-date license information. A separate page lists commercia...2669 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
We have developed gbtools, a software package that allows users to visualize meta...ly defined from plots, or be imported from third-party binning tools and overlaid...ch that results from different methods can be compared side-by-side. gbtools repo...2658 days ago
- SNPGenie is a Perl script for estimating evolutionary parameters, mainly from pooled next-generation sequencing (NGS) single-nucleotide polymorphism (SNP) variant data. SNP reports...
2654 days ago
- This website and accompaning documents are intended as a tool to help researchers dealing with non-m...ioinformatics skills. It covers all steps from tissue collection, sample preparation and computer setup, thr...
2651 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long nucleotide sequences produced by next-genera...2651 days ago
- ...rmat. It is easy for humans to read and write. It is easy for machines to parse and generate. It is based...language. JSON is built on two structures: A collection of name/value pairs. In various languages, thi...
2649 days ago
- High throughput sequencing (HTS) technologies are being applied to a wide range of important topics in biology. However, the analyses of non-model organisms, for whic...
2648 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...ate, and is especially intended for PacBio reads. It uses a hybrid s...ate is assumed to be small, and the PacBio read set, which is then c...ny insertions and deletions, and comparatively less substitutions. L...of a long read by traversing chosen paths in the graph....2643 days ago
WGS Celera Assembler version 8.3rc2
...installation.The source code package includes full source cod...BUTGCNS], [https://github.com/PacificBiosciences/pbdagcon PBDA...15K Apr 10 11:41 classifyMatesPairwise-rwxrwxr-x 1 urbe urbe 3...rbe 144K Apr 10 11:40 overlap_partition-rwxrwxr-x 1 urbe urbe...2643 days ago
