Results for "Ra"
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SeqMule: Automated human exome/genome variants detection
...single-end or paird-end FASTQ or BAM files, generates a script consisting of mor...Users can change the pipeline or fine-tune the parameters by modifying its config...calls from various callers, plotting a Venn diagram showing intersection among d...2673 days ago
- SequenceServer lets you rapidly set up a BLAST+ server with an intuitive user interface for use locally or over the web. More at http://sequenceserver.com.
2670 days ago
- ...ts and tutorials on how to assemble individual microbial genomes from metagenomes, as described in: Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagen...
2666 days ago
- Samtools is a suite of programs for interacting with high-throughput sequencing data. It consists of three separate repositories: SamtoolsReading/writing/editing/indexing/viewing SAM/BAM/CRAM formatBCFtoolsReading/writin...
2665 days ago
Pacbio Long Reads Compatible Software and Tools
...ee the individual project sites for up-to-date license information. A separate page lists commercial...io data? Email us. Software categories: De novo assembly Structural Variations Detection Refere...2664 days ago
- Krona allows hierarchical data to be explored with zooming, multi-layered pie charts. Kr...using an Excel template or KronaTools, which includes support for several bioinformatics tools and raw data formats. The interactiv...
2658 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
...age that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC v...ins including marker gene completeness, and allows the user to add or subtract bins with each other. ...2653 days ago
- SNPGenie is a Perl script for estimating evolutionary parameters, mainly from pooled next-generation sequencing (NGS) single-nucleotide polymorphism (SNP) variant data. SNP reports (acceptable in a va...
2649 days ago
- ...to help researchers dealing with non-model organisms acquire and process transcriptomic high-throughput se...formatics skills. It covers all steps from tissue collection, sample preparation and computer setup, throu...
2646 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long nucleotide sequences produced by next-generation sequencing technologies....2646 days ago
