2646 days ago
2646 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
LoRDEC is a program to correct sequencing errors in long reads from 3rd generation sequencing with high error rate, and is especially intended...ference read set, whose error rate is assumed to be small, and...omputers. It adopts a novel graph based approach: it builds a...2641 days ago
WGS Celera Assembler version 8.3rc2
..., used by some modules of Celera Assembler, is included. ...e 24K Apr 10 11:41 cat-erates-rwxrwxr-x 1 urbe urbe 1,9M...be 197K Apr 10 11:41 correct-frags-rwxrwxr-x 1 urbe urbe 259K...rbe 201K Apr 10 11:40 remove_fragment-rwxrwxr-x 1 urbe urbe 15...2641 days ago
2641 days ago
2637 days ago
DeCoSTAR - Detection of Co-evolution
...which aims at reconstructing ancestral gene or genome organizations...adjacencies- between pairs of ancestral genes or gene domains.Ancest...th, speciation, duplication, loss, transfer, which are either given...vides statistical supports on ancestral adjacencies, or the possibil...2637 days ago
Metagenomics assembly workshop !!
...Control Assembly Velvet Assembly MEGAHIT Assembly IDBA-UD Assembly Ray Assembly Gene Predictio...T Binning MaxBin Binning MetaBAT Binning Classification Kraken Taxonomic Sequence Classif...2633 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq dat...nd annotation datasets ChromHMM facilitates the biological characterization of each state. Chr...2632 days ago
2631 days ago