Results for "TE"
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SeqMule: Automated human exome/genome variants detection
...ingle-end or paird-end FASTQ or BAM files, generates a script consisting of more...s can change the pipeline or fine-tune the parameters by modifying its configurat...rious callers, plotting a Venn diagram showing intersection among different calle...2675 days ago
- SequenceServer lets you rapidly set up a BLAST+ server with an intuitive user interface for use locally or over the web. More at http://sequenceserver.com.
2672 days ago
- ...om metagenomes, as described in: Genome sequences of rare, uncultured bacteria obtained by differential c...wski, Gene W. Tyson, Kåre L. Nielsen and Per .H. Nielsen Nature Biotechnology 2013, doi: 10.10...
2668 days ago
- Samtools is a suite of programs for interacting with high-throughput sequencing data. It consists of three separate repositories: SamtoolsReadin...ing/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short...
2667 days ago
Pacbio Long Reads Compatible Software and Tools
...n addition to PacBio's own SMRT® Analysis suite. All packages are believed to...non-commercial use. See the individual project sites for up-to-date license infor...ware for PacBio data? Email us. Software categories: De novo assembly S...2667 days ago
- Krona allows hierarchical data to be explored with zooming, multi-layered pie charts. Krona charts can be created using an Excel template or KronaTools, which includes support for several bi...
2660 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
...pth) and GC values of contigs, and also to annotate the plots with taxonomic info...rved marker genes or SSU rRNA genes, can be imported simultaneously; users can ch...y statistics of bins including marker gene completeness, and allows the user to a...2655 days ago
- SNPGenie is a Perl script for estimating evolutionary parameters, mainly from pooled next-generation sequencing (NGS) single-nucleotide polymorphism (SNP) variant data. SNP reports...
2651 days ago
- This website and accompaning documents are intended as a tool to help researchers dealing wit...put sequencing data without having to learn extensive bioinformatics skills. I...issue collection, sample preparation and computer setup, through addressing bi...
2649 days ago
TMAP - torrent mapping alignment program General Notes
...torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short...nces produced by next-generation sequencing technologies. The latest TM...Torrent Suite release below. Get the latest source code: git clone g...2648 days ago
