ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin data...for large-scale functional and annotation datasets ChromHMM facilitates the biological...2625 days ago
Enrichr: a comprehensive gene set enrichment analysis
...to submit fuzzy sets, upload BED files, improved application programming interface and visualization...e for curated gene sets and a search engine that accumulates biological knowledge for further biological discoveries. Enrichr is freely...2617 days ago
2611 days ago
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for s...nformation sources. GRASS offers a mixed-integer programming formulation of the contig sca...procedure and an unconstrained binary quadratic programming approximation of the original...2591 days ago
2558 days ago
2539 days ago
MOSS: A System for Detecting Software Similarity
Moss (for a Measure Of Software Similarity) is an automatic system for determining the...s. To date, the main application of Moss has been in detecting plagiarism in programming classes. Since its developmen...2391 days ago
CHSMiner: a GUI tool to identify chromosomal homologous segments
Background The identification of chromosomal homologous segments (CHS) within and between genomes is essential for...e visualization of the results. We tested the software on both simulated and biological...2412 days ago
Computational Genomics: Applied Comparative Genomics
The primary goal of the course is for students to be grounded in theory and leave the c...tes, although the course will require familiarity with UNIX scripting and/or programming to complete the assignments a...2401 days ago
2401 days ago