Results for "miRNA target gene"
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Visualization has played an extremely important role in the current ge...idual reads (Supplementary Note 1). For example, here we show a gene fusion in the SK-BR-3 breast cancer cell line linking the genes CYTH1 and EIF3H. While it ha...2805 days ago
- Beagle is a software package that performs genotype callin...by use of localized haplotype clustering. Am J Hum Genet 81:1084-1097.doi:10.1086/521...tation with millions of reference samples. Am J Hum Genet 98:116-126.doi:10.1016/j.ajh...
2799 days ago
- ART is a set of simulation tools to generate synthetic next-generation sequencing reads. ART simulates sequ...-pair reads of three major commercial next-generation sequencing platforms: I...mark a variety of method or tools for next-generation sequencing data analysi...
2792 days ago
- HybPiper was designed for targeted sequence capture, in which...ng libraries are enriched for gene regions of interest, especially for phylogenetics. HybPiper is a suite of Pyt...ics tools in order to extract target sequences from high-throughput DNA sequencing reads. Targeted bait capture is a techniq...
2791 days ago
- EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses Whole Exome Sequencin...fication of all genomic CNVs, both overlapping and non-overlapping targeted exons by integrating the analysis of In-targ...
2765 days ago
- Comparative genomics remains a pivotal strategy to study the evolution of gene organization, and this primac...ompare unlimited numbers of genomes in a broad phylogenetic view. In addition, Genomic...
2749 days ago
- PEAR is an ultrafast, memory-efficient and highly accurate pair-end read merger. It is fully parallelized and c...PEAR evaluates all possible paired-end read overlaps and without requiring the targ...
2746 days ago
- MCscan is a computer program that can simultaneously scan multiple genomes...ogous chromosomal regions and subsequently align these regions using genes as anchors. This is the toolset for generating the synteny corresponde...
2743 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a m...Prodigal is an extremely fast gene recognition tool (written in...y locates the 3' end of every gene in the experimentally verifie...is freely available under the General Public License. ...2736 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell x gene or cell x transcript equivalence class count matrix Perform RNA velocity and single-nuclei RNA-seq analsis Qua...1178 days ago
