2687 days ago
2687 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
The DAGchainer software computes chains of syntenic genes found within complete genome sequences....vealed. This software distribution includes both the DAGchainer utility and a Java-based gra...2685 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
ConPADE (Contig Ploidy and Allele Dosage Estimation), a probabilistic method that estimates the ploidy of any given contig/scaffold based on...2679 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017 ORLANDO, USA,...large-scale and UMI support can be used in single-cell-based studies...s for healthcare using genomics. By enhancing sequence-based dia...2438 days ago
YASRA: Reference based assembler
YASRA (Yet Another Short Read Assembler) performs comparative assembly of short reads using a reference genome, which can differ substantially from the genome being sequ...2674 days ago
Laj: viewing and manipulating the output from pairwise alignment programs
Laj is a tool for viewing and manipulating the output from pairwise alignment programs such as bla...s with Java". Currently it exists in two forms, a stand-alone application and a web-based app...2674 days ago
2669 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in addition to P...oftware categories: De novo assembly Structural Variations Detection Reference-based ali...2660 days ago
2640 days ago