Results for "Software Programming"
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The Sybil software package provides a primarily web-based front-end to comparative genome datasets warehoused in a chado relational database. It was developed by the bioi...2847 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "bake-off" as an attempt to produce a realistic assessment of genome assembly software in...2847 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA sequence data. To install DECIPHER, see the Downloads page. To beg...
2824 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of miRNA (or more generall sho...s using one of several algorithm. MIRO output is furthermore compatible with software su...
2820 days ago
Entrez Direct: E-utilities on the UNIX Command Line
Entrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of interconnected databases (publicati...ned in structured XML format. This can eliminate the need for writing custom software to...2805 days ago
- ...available computational resources as well as programming acumen. Since heatmaps are...rowsers. In addition to memory requirements, programming skills and knowledge have fre...nyheatmap: an advanced user-friendly heatmap software suite capable of efficiently cre...
2803 days ago
- Beagle is a software package that performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Beagle versi...
2797 days ago
- Background. Next-generation sequencing technologies are now producing multiple times the...experiment. Our approach applies de novo assembly software to experimental reads and so-...CORD on both simulated and real data. We made our software pu...
2768 days ago
- Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute. It provides basic data structures for effi...
2765 days ago
- fqtools is a software suite for fast processing of FASTQ files. Various file manipulations are supported. See below for a full list of the subcommands avai...
2755 days ago
