Results for "NGS analysis"
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The blog is a collection of script examples with example data and output plots. R produce excellent quality graphs for data analysis, science and business presentation, publications and other purposes. Self-help codes and examples are provided. Enjoy nice graphs !!2797 days ago
- EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses...c CNVs, both overlapping and non-overlapping targeted exons by integrating the analysis of In-targets and Off- target...
2771 days ago
- Useful script for NGS analysis.
2771 days ago
- The automated reconstruction of genome sequences in ancient genome analysis is a multifaceted process. EAGER encompa...
2761 days ago
- caffMatch is a novel scaffolding tool based on Maximum-Weight Matching able to produce high-quality scaffolds from NGS data...
2758 days ago
BIMA V3: an aligner customized for mate pair library sequencing
Summary: Mate pair library sequencing is an effective and economical method for detec...s a challenging and time consuming process for most NGS alignment programs. Large ins...20 times faster and 25% more accurate than popular NGS alig...2757 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS (Genomic Assemblies Merger for Next Generation Sequencing), whose primary goal is to merge two or more assemblies in order to enhance contiguity and correctness of both. GAM-NGS does...2752 days ago
- pyScaf orders contigs from genome assemblies utilising several types of information: paired-end (PE) and/or mate-pair libraries (NGS-based mode) long reads (NGS-base...
2752 days ago
- Motif based sequence analysis suits The MEME Suite allows the biologist to...analyses. The MEME Suite supports motif-based analysis of DNA, RNA and prot...o known motifs (Tomtom), finding preferred spacings between motifs (SpaMo), predicting...
2748 days ago
- MetaBAT, An Efficient Tool for Accurately Reconstructing Single Genomes from Compl...ins are >50% complete with <5% contamination from other species. Further analysis shows that the quality of the...
2675 days ago
