Results for "Next Generation Sequencing (NGS) Conference"
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Background: Transcriptomics, metabolomics, metagenomics, and other various next-generation sequencing (-omics) fields are known for their production of large datasets. Visualizing such big data has po...2805 days ago
- ART is a set of simulation tools to generate synthetic next-generation sequencing reads. ART simulates sequencing reads by mimicking real seque...rized from large recalibrated sequencing data. ART can also simulate r...ads of three major commercial next-generation sequencing platforms: Illumina's Solexa,...
2792 days ago
- HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene reg...sequences from high-throughput DNA sequencing reads. Targeted bait capture...ipeline starts with high-throughput seque...te putative paralogs, and calculate sequencing...
2791 days ago
- Background. Next-generation sequencing technologies are now producing multiple times the ge...a modified reference sequence. In this way, it can very quickly, and at no additional sequencing...
2770 days ago
- EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses Whole Exome Sequencing (WES) data to identify CNVs. EXCAV...yed for the identification of CNVs in small as well as large-scale re-sequencing...
2765 days ago
- SWALO (scaffolding with assembly likelihood optimization) is a method for scaffolding based on likelihood of genome assemblies computed using generative models for sequencing. Download Git repository of SWALO is at https://github.com/atifrahman/SWALO.
2765 days ago
- Useful script for NGS analysis.
2765 days ago
- Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing...
2751 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-...http://learninglover.com/examples.php?id=59 http://www.cs.rpi.edu/~magdon/ps/conference/super_biokdd.pdf https://ocw...2753 days ago
- caffMatch is a novel scaffolding tool based on Maximum-Weight Matching able to produce high-quality scaffolds from NGS data (reads and contigs). The tool is written in Py...
2752 days ago
