splitbam: splits a BAM by chromosomes
splitbam splits a BAM by chromosomes. Using the reference sequence dictionary (*.dict), it also creates some empty BAM files if no sam record was found for a chromosome. A pair o...2646 days ago
YASRA: Reference based assembler
...an differ substantially from the genome being sequenced. Mapping reads to reference...makes use of LASTZ (Harris et al), a pairwise sequence aligner compatible with BLAST...stz/newer for newer version) for aligning the sequences to the reference genome. Ple...2645 days ago
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LoRDEC: a hybrid error correction program for long, PacBio reads
...t errors of all these types. After correction, a larger portion of the sequence of PacBio reads is usable for detection of region of similarity with other sequences, for aligning them to the co...2606 days ago
Metagenomics assembly workshop !!
...rediction Assembly Evaluation Read Mapping MetaQUAST Binning MaxBin Binning MetaBAT Binning Classification Kraken Taxonomic Sequence Classification System...2598 days ago