Results for "Mate pair sequencing"
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With PhenoGram researchers can create chomosomal ideograms annotated with lines in color at specific base-pair locations, or colored base-pair to ba...2667 days ago
- Samtools is a suite of programs for interacting with high-throughput sequencing data. It consists of three se...libA C library for reading/writing high-throughput sequencing data Samtools and BCFtools b...
2659 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
We have developed gbtools, a software package that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC values of conti...2648 days ago
- SNPGenie is a Perl script for estimating evolutionary parameters, mainly from pooled next-generation sequencing (NGS) single-nucleotide polym...
2644 days ago
- This website and accompaning documents are intended as...acquire and process transcriptomic high-throughput sequencing data without having to learn....stanford.edu/denovo.html http://sfg.stanford.edu/sequencing.html http://sfg.stanford.edu...
2641 days ago
- High throughput sequencing (HTS) technologies are being applied to a wide range of important topics in biology. However, the analyses of non-model organisms, for which little pre...
2639 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
LoRDEC is a program to correct sequencing errors in long reads from 3rd generation sequencing with high error rate, and is especially intended for PacBio reads. It uses a hybrid strategy, meaning that it uses tw...2634 days ago
- DBG2OLC:Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies Our work is pub...Using Long Erroneous Reads of the Third Generation Sequencing Technologies. Sci. Rep. 6, 31...
2624 days ago
- FASTQ format is a text-based format for storing both a biological se...come the de facto standard for storing the output of high-throughput sequencing instruments such as the ...
2611 days ago
CLA: Contig-Layout-Authenticator
To improve upon the shortcomings associated with the construction of draft genomes with Illumina paired-end sequencing, we developed Contig-La...ne can scaffold reference-sorted contigs based on paired reads, resulting in better assemb...2609 days ago
