SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script lin...2674 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compat...o® data, in addition to PacBio's own SMRT® Analysis suite. All packages are belie...ased alignment Consensus and variant calling RNA analysis Epigenetic base modification...2666 days ago
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Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide exper...ly contains a large collection of diverse gene set libraries available for analysis and download. In total, Enric...2623 days ago
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CAR: Reconstructing Contiguous Regions of an Ancestral Genome
We describe a new method for predicting the ancestral order and orientation of t...a. The precision is further increased by mapping inversions as small as 31 bp. Analysis of the predicted evolutionary...2602 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS is a tool able to merge two or more assemblies in order to improve contiguity and correctness. It can be used on all NGS-base...2601 days ago