BBTools for bioinformatician !
...flag "-Xmx8g" and increase "max=" to something much higher.Alternatively, if these are assemblies and you're interested in continuity information (L50, N50, etc), you can run stats...2288 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...unless overriden. [null] (Illumina Moleculo) pacbio (PacBio SMRT): -i25 -l50 -m1 -M1 -O1,1,2,2 -E1,1,1,1 -w200 -b0 -e0.30 -d0.30 ont2d (Oxford Nanopore): -i25 -l50 -m1 -M1 -O1,1,1,1 -E1,1,1,1 -...2140 days ago