Results for "SNV"
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PureCN: copy number calling and SNV classification using targeted short read sequencing
...loss of heterozygosity (LOH), and classifies single nucleotide variants (SNVs) by somatic status and clona...C, Chiang D, Morrissey M (2016). “PureCN: Copy number calling and SNV classification using targeted...2138 days ago
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List of Bioinformatics Software Tools for Next Generation Sequencing
...not needed Output: LoFreq Description: SNV caller, Python language, stan...l Output: VCF MarginAlign Description: SNV caller, specifically tailored...nnotation Dependent Depletion; tool for scoring SNV deletions/insertions; “...2951 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...nbsp;k-mers profiles of the RNA-seq paired-end reads Software (Java) https://github.com/ChimeRScope/ChimeRScope/wiki FastGT Genotyping of known SNV/SNP variants directly from ra...2413 days ago
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List of non-commercial NGS genotype-calling software
Meaningful analysis of next-generation sequencing (NGS) data, which are produced extensively by genetics and genomics studies, relies crucially on the accurate calling of SNPs and genotypes. Recently developed statistical methods both improve and quantify the considerable uncertainty associated w...Tags: List, non-commercial, NGS, genotype-calling, software, tools, snv
2138 days ago
