Results for "AI"
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...der to produce accurate results, A5-miseq requires Illumina data with certain characteristics. A5-miseq wi...uality is dubious. You have been warned! Datasets consisting solely of unpaired reads are not currently su...2831 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source package. While most...ambus is able to accept contig linking data other than specified by mate-pairs. Such sources of informatio...
2833 days ago
- ...a workflow, with several possible post-treatments meant to facilitate the analysis of the results. The choice of the post-treatment depends on the availability of a reference genome...
2833 days ago
- ...r of properties that should hold true for a correct assembly (e.g., mate-pairs are aligned at the correct distance from each other in the assembly, the depth of coverage is fairly uniform along contigs, etc...
2796 days ago
- ...reas the output format can be chosen among several formats. The application is especially optimized and adapted for the creation of high-quality, detailed circular maps of organella...
2833 days ago
- Most variant calling pipelines result in files containing large quantities of variant information. The variant call format (vcf) is an increasingly popular format for this...
2830 days ago
- Faster, more accurate algorithms function prediction "GeneMANIA (Multiple Association Network Integration Algorithm)" have however been developed in recent years and are publicly available on the web, indicating the future direction of function prediction.
2827 days ago
- In this exercise, a previously annotated gene will be used to measure the accuracy of different gene finding approaches. GRAIL, GENSCAN, geneid, FGENESH, GenomeScan, GrailEXP and GENEWISE will be used...
2823 days ago
- ...a gene prediction tool that incorporates RNA-Seq data into unsupervised training and subsequently generate...predictions. AUGUSTUS is a gene finder that usually requires supervised training and uses information from...
1965 days ago
- ...takes as input assembled contigs, paired-end and/or mate pairs sequencing libraries a...genome assembly or scaffolding more details. The pipeline consists of...Illumina, 454 or Sanger) and library types (paired-end, mate pairs, fosmids)...
2817 days ago
