TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long nucleotide sequences produced by next-generation sequencing technologies. The latest...2589 days ago
2645 days ago
FSA: Fast Statistical Alignment
...imates, FSA builds a multiple alignment using only pairwise estimatio...e for constructing a multiple alignment from pairwise comparisons, de...thods for constructing better alignments: FSA uses machine-learnin...e included GUI, MAD (Multiple Alignment Display), can display the int...2645 days ago
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2633 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...Unique Molecular Identifiers, or UMIs, for DNA-, RNA- and small-RNA-Seq. UMI support in Strand NGS is end-to-end, spanning alignment to variant calling in DNA-Seq, and alignment to quantification in RNA- and...2386 days ago
Laj: viewing and manipulating the output from pairwise alignment programs
...ng and manipulating the output from pairwise alignment programs such as blastz. It c...otplot, pip, and text representations of the alignments, a diagram showing the locat...platforms; indeed its name stands for "Local Alignments with Java". Currently it exi...2622 days ago
2615 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script line by line. Users can ch...2615 days ago
Pacbio Long Reads Compatible Software and Tools
...open source software for PacBio data? Email us. Software categories: De novo assembly Structural Variations Detection Reference-based alignment Consensus and variant callin...2607 days ago