List of generic simulation software/tools/resource with brief description and homepage !!!
...cent effective population size reductions from allele data frequencies http://www.e...settings. If you need models with more than 2 alleles please use the GenomePop pro...r generating haplotype data with pre-specified allele frequencies and LD coefficien...3752 days ago
Commercial and public next-gen-seq (NGS) software
...a analysis. Streamlined analysis workflows for: ChIP-Seq, RNA-Seq, DNA-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Number, Allele-Specific Copy Number, LOH, As...3534 days ago
Apps for Busy Bioinformatics Researchers !!!
...s), and loss of heterozygosity (LOH) events Quickly find variants of interest by filtering variants based on associated genes, functional impact, allele frequency in data sets, and c...3557 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ines Annotates genomic data with allele and genotype frequency, funct...alysis, DNA Copy number including allele specific copy number and Loss...F files; one for TRs and observed alleles, another file contains link...tion, selected ENCODE annotation, allele frequency in the 1000 Genomes...2924 days ago
List of non-commercial NGS genotype-calling software
...alSFS http://128.32.118.212/thorfinn/realSFS/ Single-sample Aligned reads Software for SNP and genotype calling using single individuals and allele frequencies. Site frequency s...2112 days ago