How to get better alignment results of PAcBio data?
HI! I am Nadia. I am trying to align PAcBio data (data from third generation sequencer) using bwa mem. I am getting very less number of aligned reads in SAM file having coverage of less than 10X. I tried to use minimap2 as well for alignment but again the quality of sam file isn,t good. I am get...Tags: PacBio, genomic data, NGS, assembly, Arabidopsis data
1822 days ago