Tags: Bioinformatics, Assembly, HGA, NGS
2729 days ago
Tags: Bioinformatics, Assembly, Scaffoldings, NGS, SWALO
2728 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, Minia, NGS, de Bruijn
2720 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, SGA, NGS
2720 days ago
Standardized velvet assembly report
Requirements: velvet (velveth velvetg should be in your PATH) R (with Sweave) pdflatex (usually part of TeTeX) ggplot2 (from R prompt type install.packages("ggplot2","proto","xtable")) Perl Optional: BLAT or BLAST (to generate alignments against a reference genome). If using BLAT, ad...Tags: Bioinformatics, Analysis, Assembly, Genome, Velvet, standardized-velvet-assembly-report
2719 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, Velvet, NGS, Tutorial
2719 days ago
Tags: Bioinformatics, Analysis, Assembly, NGS, Cutadapt
2714 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-science/data-science-tutorials/greedy-is-good/ This webpage is also useful for the same: http://learninglover.com/examples.php?id=59 http://www.cs.rpi.edu/~magdon/ps/conference/super_biokdd.pdf https://ocw.mit....Tags: Bioinformatics, Assembly, Greedy, Genome, NGS
2716 days ago
Tags: Bioinformatics, Analysis, Assembly, Genome, NGS, ScaffMatch, Scaffoldings
2715 days ago