BBTools for bioinformatician !
...u'd want to only keep the paired output. BBSplit is based on BBMap, so it is a...BDuk and Seal (which can be used similarly to BBSplit) are always deterministic.&nb...----------------------------------------------BBSplit.shBBSplit now has the ability...2270 days ago
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
BBSplit internally uses BBMap to map reads t...e ambiguous between human and mouse. BBSplit tracks this additional ambigu...mbig2” flag. The normal use of BBSplit is like Seal, either quantify...li and salmonella, you could do this:bbsplit.sh in=reads.fq ref=ecoli.fa,s...2313 days ago