Results for "Biological Processes"
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Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA and proteins). We also provide biological motivation, and methods of biological verification of such patterns. Fi...2694 days ago
- Motif based sequence analysis suits The MEME Suite allows the biologist to discover novel motifs in collection...(Tomtom), finding preferred spacings between motifs (SpaMo), predicting the biologica...
2693 days ago
Many-Core Engine (MCE) for Perl example
MCE spawns a pool of workers and therefore does not fork a new process per each element...CE::Mutex Provides a simple semaphore implementation supporting threads and processes. MCE::Queue Provides a hybr...2654 days ago
- This website and accompaning documents are intended as a tool to help researchers dealing with non-model organisms ac...tissue collection, sample preparation and computer setup, through addressing biologica...
2593 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin data...for large-scale functional and annotation datasets ChromHMM facilitates the biologica...2576 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we...resource for curated gene sets and a search engine that accumulates biological knowledge for further biologica...2568 days ago
- FASTQ format is a text-based format for storing both a biological sequence (usually nucleotide sequence) and its corresponding quality scores. Both the sequence letter a...
2562 days ago
CHSMiner: a GUI tool to identify chromosomal homologous segments
...in and between genomes is essential for comparative genomics. Various processes including insertion/deletion a...lization of the results. We tested the software on both simulated and biological realistic data and compared...2363 days ago
- Computational Biology is a huge field of study, that touches upon many distinct algorithmic and biologica...
2352 days ago
Biological file format tutorial
This section explains some of the commonly used file formats in bioinformatics. The information provided here is basic and designed to help users to distinguish the diff...2334 days ago
