Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA and proteins). We also provide biological motivation, and methods of biological verification of such patterns. Fin...2684 days ago
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2581 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin data...for large-scale functional and annotation datasets ChromHMM facilitates the biological...2566 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we...resource for curated gene sets and a search engine that accumulates biological knowledge for further biological...2558 days ago
2552 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that allows users to analyse data pro...g Public Next-Gen Data..'). Extensibility:Algorithm developers and computer programmers can develop their own modules...2488 days ago
CHSMiner: a GUI tool to identify chromosomal homologous segments
Background The identification of chromosomal homologous segments (CHS) within and between genomes is essential for...e visualization of the results. We tested the software on both simulated and biological...2352 days ago
2342 days ago