Results for "Command Line"
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Entrez Direct: E-utilities on the UNIX Command Line
..., etc.) from a UNIX terminal window. Functions take search terms from command-line arguments. Individual operations...answer ad hoc questions. Queries can move seamlessly between EDirect commands and UNIX utilities or scr...2769 days ago
- Visualization has played an extremely important role in the...creating Ribbon (genomeribbon.com) an interactive online visualization tool that displ...how a gene fusion in the SK-BR-3 breast cancer cell line linking the genes CYTH1 and E...
2767 days ago
- ...ore accurate genotype phasing algorithm and a very fast and accurate genotype imputation algorithm. Version 4.1 also has several changes to the command line arguments which are described...
2761 days ago
- IMPUTE2 is a computer program for phasing observed genotypes and imputing missing genotypes. Most people use ju...ou work through these examples and try to understand what the elements of each comm...
2761 days ago
- This is a comprehensive update to Shaun Purcell's PLINK command-line program, developed by Christopher Chang with support from the NIH-NIDDK's Laboratory of Biol...
2761 days ago
- ...lers (e.g. Velvet). Download Minia 2.0.7 Linux 64-bits binaries (Source code) (Legacy codebase) For the impatient A typical Minia command line looks like: ./minia -in read...
2719 days ago
- ...produced after mapping reads to contigs and the resulting scaffolds file `scaffolds.fa` fasta file; -c) Contig fasta file; -m) Command line argument with no options. It...
2714 days ago
Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of...nally we list publicly available tools and databases for pattern discovery. On-line supplement is available throu...2704 days ago
Many-Core Engine (MCE) for Perl example
MCE spawns a pool of workers and therefore does not fork a new process per each element of data. Instead, MCE follows a bank queuing model. Imagine the line being the data and bank-telle...2665 days ago
- ...., intersect two interval files), quite sophisticated analyses can be conducted by combining multiple bedtools operations on the UNIX command line. bedtools is developed...
2641 days ago
