Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a file of quality...mbly & Analysis DNA Sequence Assembler is revolutionary bioinformatics software fo...SCARF is a next-gen sequence assembly tool for evoluti...2685 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated f...rchical system that ideally reflects evolutionary history. cDNA -- Compleme...ter, and to have arisen later in the evolution of the clade. For example, "p...hind this pattern. phylogeny -- The evoluti...2462 days ago
List of visualization tools for network biology
Network analysis is any structured technique used to mathematically analyze a circuit (a “network” o...tion networks across species to infer protein complexes that are conserved in evoluti...2288 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on genome sequencing, assembly, annotation and a...d.php find_ltr http://darwin.informatics.indiana.edu/cgi-bin/evoluti...2274 days ago
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bioinformatics | Oxford Ac...rticle/30/15/2210/2391162 Genome Architecture and Evolution of a Unichromosomal Asexual N...://db-mml.sjtu.edu.cn/ICEberg/index.php Satsuma - Evoluti...2241 days ago
Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for further experimental investigation is a key challenge in current sequencing studie...rvation or acceleration P values based on an alignment and a model of neutral evoluti...2203 days ago
Ancestral sequence reconstruction steps !
Ancestral sequence reconstruction (ASR) – also known as ancestral gene/se...s a technique used in the study of molecular evolution. The method consists of the s...to reveal the mechanisms and dynamics of protein evoluti...2179 days ago