FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
FastGT is a program package for whole-genome genotyping of...encing reads. It is written in C and runs in Linux. FastGT uses a list of variant-specif...verage low-cost Linux server. http://bioinfo.ut.ee/FastGT/ https://github.com/bioinfo-...1574 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...ript prediction using gene k-mers profiles of the RNA-seq paired-end reads Software (Java) https://github.com/ChimeRScope/ChimeRScope/wiki FastGT Genotyping of known SNV/SNP...2386 days ago
FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
FastGT is a program package for whole-genome genotyping of genome variants directly from raw sequencing reads. It is written in C and runs in Linux. FastGT uses a list of variant-specific k-mer pairs that are unique in human genome, counts the frequency of k-mers in sequencing data and predicts t...Tags: FastGT, alignment-free, method, calling, common, SNVs, directly, raw, sequencing, reads, alignment-free
1574 days ago