Results for "Genome"
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Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny bloc...hared by pigs and cattle) were detected using the pig and human genomes as a reference, respectively...2731 days ago
Method in Comparative genomics !!
...or the automatic determination of genome correspondence. The algorithm...of duplicated genes in the yeast genome. The remaining ambiguities in...We used this test to revisit the genome of S. cerevisiae, reducing th...nal motif discovery. Based on the genome-wide conservation patterns of...2731 days ago
- ... an assembly of heterozygous genomes.Program takes as input ...eturns scaffolded homozygous genome assembly, that should be ...lose the gaps resulting from genome assembly or scaffolding ...e laptop for small-to-medium size genomes flexible toward many s...
2800 days ago
OPERA : Optimal Paired-End Read Assembler
...intermediate contigs/scaffolds assembled in a genome assembly project, in a proces...tures that are important for scaffolding large genomes (multi-library support, bett...w features and algorithms is available at Genome Biology. We look forward to g...2792 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mammal-sized genome. In addition to the role of a typical assembler,...
2792 days ago
- ...ht a dramatic shift in the world of sequencing. Merely five years back, genome sequencing of higher eukaryotes used to be very expensive endeavor. To get a genome of interest sequenced, hundre...
2796 days ago
- ...a primarily web-based front-end to comparative genome datasets warehoused in a chad...Venter Institute (JCVI) and the Institute for Genome Sciences (IGS) at the Univers...of research projects that involve comparative genome analysis. The following secti...
2794 days ago
GAGE : Genome Assembly Gold-standard Evaluation
...s an evaluation of the very latest large-scale genome assembly algorithms. We have...n attempt to produce a realistic assessment of genome assembly software in a rapidl...of GAGE have now been published in the journal Genome Research: GAGE: A critic...2794 days ago
CGView - Circular Genome Viewer
...isplay and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications.... Users can interact with the genome using a powerful pan-and-zoom...e or for application to other genome maps using GView's custom fil...2782 days ago
BLAST Ring Image Generator (BRIG)
...hat can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. The applicatio...Contig boundaries and read coverage can be displayed for draft genomes; customized graphs and annot...2771 days ago
