Structural variation: the hidden genomic treasure
...jects have revealed substantial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNPs) and short indels. Structural Variations (SVs)...2703 days ago
2531 days ago
Converting a VCF into a FASTA given some reference !
...rl script vcfutils.pl which does this, the function vcf2fq (lines 469-528) This script has been modified by others to convert InDels as well, e.g. this ...2116 days ago