Structural variation: the hidden genomic treasure
...jects have revealed substantial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNPs) and short indels. Structural Variations (SVs)...2724 days ago
2552 days ago
Converting a VCF into a FASTA given some reference !
...rl script vcfutils.pl which does this, the function vcf2fq (lines 469-528) This script has been modified by others to convert InDels as well, e.g. this ...2137 days ago