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  • SvABA: Structural variation and indel detection by local assembly

    SvABA is a method for detecting structural variants in sequencing data using genome-wide local assembly. Under the hood, SvABA uses a custom implementation of SGA (String Graph Assembler) by Jared Simpson, and BWA-MEM by Heng Li. Contigs are assembled for every 25kb window (wi...

    Tags: SvABA, Structural, variation, indel, detection, local, assembly

    1517 days ago