Results for "Long non-coding RNAs"
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Visualization has played an extremely important role in the current genomic...nstead, structural variations captured by long reads or assembled contigs of...ualization tool that displays alignments along both...ncing, Ribbon shows that there are indeed long...2750 days ago
- LINKS is a genomics application for scaffolding genome assemblies with long reads, such as those produced by Oxford Nanopore Te...d. It can be used to scaffold high-quality draft genome assemblies with any long...
2736 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
Next Generation Sequencing has totally changed genomics: we are able to produce huge amounts of...nism sequenced with short reads, the results are still far from those achievable with long...2691 days ago
MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs) Description MeGAMerge is a perl based wrapper/tool that can accept any numbe...2691 days ago
- quickmerge uses a simple concept to improve contiguity of genome assemblies based on long molecule sequences, often with dramatic outcom...lies made with illumina short reads and PacBio long reads...nsidered to cover genomic regions which PacBio long...
2691 days ago
- pyScaf orders contigs from genome assemblies utilising several types of information: paired-end (PE) and/or mate-pair libraries (NGS-based mode) long...
2691 days ago
- If genomes were completely random sequences in a statistical sense, 'overlap-consensus-layout' m...ugh to assemble large genomes from Sanger reads. In contrast, real genomes often have long...
2690 days ago
- Cgaln (Coarse grained alignment) is a program designed to align a pair of whole genomic sequence...earrangements are taken into consideration while each alignable region is extended as long...
2626 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software for short and long...2586 days ago
FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence alignment algorithm which uses...r small-scale analyses of proteins or RNAs to large-scale problems such...ng thousands of sequences or megabase-long seque...accuracy. FSA can quickly align very long sequences using the "anchor a...2642 days ago
