repeat-aware: Repeat aware scaffolding evaluation framework by Igor Mandric
...ontigs in the output scaffolding to contigs in the reference scaffolding in the sense of the number of correct links. https://github.com/mandricigor/repeat-aware2254 days ago
repeat-aware: Repeat aware scaffolding evaluation framework by Igor Mandric
Genome scaffolding is a classical challenging problem in bioinformatics. It refers to joining assembly contigs into chains (called scaffolds). The join between two contigs A and B is considered correct if: Their relative orientation is correct Their relative order is correct The gap estimate...Tags: Repeat, aware, scaffolding, evaluation, framework, Igor, Mandric, repeat-aware
2254 days ago