BOL: Results for "MashMap"

Results for "MashMap"

- Jit@jit.aber
MashMap: a fast and approximate software for mapping long reads (PacBio/ONT) or assembly to reference genome(s)
MashMap is a fast and approximate software for mapping long reads (PacBio/ONT) or assembly to reference genome(s). It maps a query sequence against a reference region i...
2348 days ago
- Jit@jit.aber
FastANI: fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI)
...lying procedure follows a similar workflow as described by Goris et al. 2007. However, it avoids expensive sequence alignments and uses Mashmap as its MinHash based seq...
2135 days ago

- Jit@jit.aber
Comment on "MashMap: a fast and approximate software for mapping long reads (PacBio/ONT) or assembly to reference genome(s)"
➜ mashmap-Linux64-v2.0 git:(master) ✗ ./mashmap -h-----------------Mashmap is an approximate long read or contig m...ilarity-----------------Example usage:$ mashmap -r ref.fa -q seq.fq [OPTIONS]...t;value> output file name [default : mashmap.out] -k <value>, --kme...
2135 days ago