Results for "Multiple"
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MCscan is a computer program that can simultaneously scan multiple genomes to identify homologous chromosomal regions and subsequently align these regions using genes as anchors. This...2688 days ago
- ...using a biologically relevant breakpoint penalty. YAHA can also report multiple mappings per defined segment...across all SV classes, and especially excels at complex SVs comprising multiple breakpoints. Availability: Y...
2659 days ago
- ...download needs built-in wizard for batch post-processing of downloaded files (archive extraction, file conversion, etc.) capable of performing multiple download or update tasks simu...
2622 days ago
Many-Core Engine (MCE) for Perl example
...tilizing this model. MCE::Flow is similar to MCE::Loop, but allows for multiple code blocks to run in paralle...CE::Stream Provides an efficient parallel implementation for chaining multiple maps and greps together throu...2648 days ago
- Our basic strategy in building homology maps is to use exons that are orthologous in multiple genomes as map "anchors." Given K genomes, the steps in the map construction are as follow...
2642 days ago
FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence alignment algorithm whic...ivergence estimates, FSA builds a multiple alignment using only pairwise...ling technique for constructing a multiple alignment from pairwise compa...reduce the computational cost of multiple alignment. This randomized in...2642 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
...ds allowing extensive DNA polymorphism analyses on large datasets. Among other features, the newly implemented methods allow for: (i) analyses on multiple data files; (ii) haplotype ph...2642 days ago
- ...unassembled sequence data. BRIG also accepts SAM-formatted read-mapping files enabling genomic regions present in unassembled sequence data from multiple samples to be compared simult...
2631 days ago
- ...annotation objects are displayed in Sockeye by using custom 3D models. Ensembl-derived and imported sequences can be analyzed by using a suite of multiple and pair-wise alignment algor...
2631 days ago
- ...p;count, complement, and shuffle genomic intervals from multiple files in widely-used genomic...val files), quite sophisticated analyses can be conducted by combining multiple bedtools operations on the UN...
2624 days ago
