how to determine @RG tags from a FastQ header??
i have downloaded sra file and converted into paired end FastQ having following headers: @HWUSI-EAS754_0001:4:1:5605:1034#GCCAT The head and tail of file are as follow Head: ==> ERR042057_1.fastq <==@HWUSI-EAS754_0001:4:1:5605:1034#GCCAATTNACTGTTTCTCTAAAACCTTACAAGAAAAACTAAGCTTCTCTAAACTT...Tags: NGS READGROUPS GATK FastQ
2964 days ago