Results for "OPERA"

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  • OPERA : Optimal Paired-End Read Assembler

    OPERA (Optimal Paired-End Read Assembler) i...t, in a process known as Scaffolding. OPERA is based on an exact algorith..., we have made significant changes to OPERA (v1.0 onwards) including refi...download and use our latest version: OPERA-LG. In our benchmarks, it has...

    2795 days ago

  • Opera: An optimal genome scaffolding program

    Opera (Optimal Paired-End Read Assembler) is a sequence a...shotgun-sequencing reads.An updated version called OPERA-LG has been re-engineered wit...Bertrand, Burton K. H. Chia and Niranjan Nagarajan. OPERA-LG: efficient and exact scaff...

    2351 days ago

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  • Download blasr 1.3 version

    ...il/blasr-1.3.1/blasr I'm running "OPERA-LG_v2.0.5/bin/preprocess_read...x -p all_p_ctg.fa /home/urbe/Tools/OPERA-LG_v2.0.6/all_p_ctg.fa[Thu Ju...lONT/allONT.fasta /home/urbe/Tools/OPERA-LG_v2.0.6/all_p_ctg.fa | cut...ff-with-repeat.bam/home/urbe/Tools/OPERA-LG_v2.0.6/bin/OPERA-LG config...

    2151 days ago

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  • Genome Assembly Tools and Software - PART1 !!

    ...uld be Apps running on the Android operating system rather than the ad...is equivalent to the edge merging operations in a semi-group. Then a...and careful graph traversal. Opera 2.0.2 – Sequence Assemb...computational knowledge can easily operate the pipeline. aTRAM&nb...

    2686 days ago

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  • OPERA : Optimal Paired-End Read Assembler

    OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikipedia.org/wiki/Sequence_assembly). It uses information from paired-end/mate-pair/long reads to order and orient the intermediate contigs/scaffolds assembled in a genome assembly project, in a process known as ...

    Tags: Bioinformatics, Analysis, NGS, OPERA, Assembler, Genome

    2795 days ago

  • Opera: An optimal genome scaffolding program

    Opera (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikipedia.org/wiki/Sequence_assembly ). It uses information from paired-end or long reads to optimally order and orient contigs assembled from shotgun-sequencing reads.An updated version called OPERA-LG has b...

    Tags: Opera, optimal, genome, scaffolding, program

    2351 days ago