2621 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in...; Analysis suite. All packages are believed to be open source or freely available for non-c...ists commercial software. Know of any other open sourc...2621 days ago
WGS Celera Assembler version 8.3rc2
These are release notes for Celera Assembler version 8.3rc2, which was released on...nary distributions ready for installation.The source code package includes full source code (revision 4627), Makefil...n can be found online at http://wgs-assembler.sourc...2595 days ago
2595 days ago
2570 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
PAGIT addresses the need for software to generate high quality draft genomes. It is based on...g gaps in assembled genomes using mate pair information. It is able to close gaps left open...2563 days ago
CABOG: Celera Assembler with Best Overlap Graph
CABOG (Celera Assembler with Best Overlap Graph) is scientific software for DNA research. CABOG has...sequence. The software was released to the public domain in 2004. Its open source repository on Sourc...2560 days ago
2555 days ago
SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology
SIMBA, SImple Manager for Bacterial Assemblies, is a Web interface for managing assembly projects of bacterial ge...tion Sequencing (NGS) platforms quickly, easily and effectively. SIMBA also is open sourc...2552 days ago
DIYA: a bacterial annotation pipeline for any genomics lab
DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV http://gmod.org/wiki/Diya2514 days ago