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Sushi: An R/Bioconductor package for visualizing genomic data
Sushi: An R/Bioconductor package for visualizing genomic data2803 days ago
- ...and display basepairs in colour and to also visualize corresponding multiple sequence alignments and co-variation information.R4RNA is the R package powering R-chie, available fo...
2802 days ago
- The Sybil software package provides a primarily web-based front-end to comparative genome datasets w...ils about the overall architecture and external dependencies of the Sybil package.
2796 days ago
CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or as a vis...2784 days ago
- Beagle is a software package that performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Beagle version 4.1 ha...
2746 days ago
- ...m from here. You will need to choose the link that matches your computing platform and then follow the instructions for opening the download package. Once you have done this, yo...
2746 days ago
- v0.0 by Glenn Hickey (hickey@soe.ucsc.edu) Progressive Cactus is a whole-genome alignment package. Requirements git gcc 4.2 or newer python 2.7 wget 64bit processor and build...
2664 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new features and analytical methods allowing extensive DNA pol...2644 days ago
- maftools - An R package to summarize, analyze and visualize MAF files. Introduction. With advance...genetic variants is stored in the form of Mutation Annotation Format. This package attempts to summarize, analyz...
2634 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
We have developed gbtools, a software package that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC values of contigs, and also to annot...2596 days ago
