Results for "Primer"

Blogs

  • BBTools for bioinformatician !

    ...------Reformat.sh Count k-mers/find unknown primers   Code: $ reform...100 AAATTTTTTTCCCCCCCCCC 85 ...etc. If the primers are 20bp long, they should b...ge is similar to bbmap.sh or mapPacBio.sh. For primers, which I assume will be shor...

    2268 days ago

  • Illumina based assembly pipeline steps !

    ...lling Read alignment (Bowtie 2) Sort and index alignments (SAMtools) Primer sequence removal (iVar; ampli...Intersect variants across callers (BCFTools) De novo assembly Primer trimming (Cutadapt; amplicon...

    874 days ago