Results for "Programming with Perl"
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SNPGenie is a Perl script for estimating evolutionary parameters, mainly from pooled next-generation sequencing...ptable in a variety of formats) much each correspond to a single population, with variants call...2606 days ago
- ...a subset of the JavaScript Programming Language, Standard ECMA-...ng C, C++, C#, Java, JavaScript, Perl, Python, and many others. These prop...structures. Virtually all modern programming languages support them...a format that is interchangeable with programming languages also be...
2602 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide exp...ichr including the ability to submit fuzzy sets, upload BED files, improved application prog...2579 days ago
- SSPACE standard is a stand-alone program for scaffolding pre-assembled contigs using...combine them into scaffolds. Currently we offer this as a command-line tool in Perl. The input data is given by p...
2571 days ago
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for scaffolding second-g...ources. GRASS offers a mixed-integer programming formulation of the contig sca...nd an unconstrained binary quadratic programming approximation of the original problem. We compared GRASS with...2553 days ago
Genetic-mapper: SVG Genetic Map Drawer
Genetic-mapper is a perl script able to draw publication-ready vectorial genetic maps. Perl script for creating a publication-ready...be submitted for publication and edited with any vectorial drawi...R). The input file must be a text file with at least the marker name (ID)...2526 days ago
- The AnnotationSketch module is a versatile and efficient C-based drawing library f...bsp;distribution. Additionally, bindings to the Lua, Python and Rubyprog...
2519 days ago
- The Charm City Circleator--or Circleator for short--is a Perl-based visualization tool developed at the Institute for Geno...d alignments. Key Features Circleator... Builds on BioPerl and the input file forma...
2519 days ago
slacTree: SVG Large Annotated Circular Tree drawing
A simple, extensible, Perl script for producing figures of large phylog...on quality figures of circular trees with more than 1000 taxa with custom annotations Because it is a single Perl script with very few...re trees or highly magnified regions with unlimited resolution Circula...2512 days ago
Perlbrew: admin-free perl installation management tool.
perlbrew is an admin-free perl installation management tool. The...al: \curl -L https://install.perl...h If you prefer to install with cpan, there are two steps: s...ew init If it is installed with cpan, the perlbrew executable...be installed as /usr/bin/perlbrew or /usr/local/b...2503 days ago
