Results for "Satsuma"
Bio-Scripts
Loop over with all files in a directory in bash
...-11-13/GCA_000196735.1_ASM19673v1_genomic.fna path=/home/urbe/Tools/SATSUMA/satsuma-code-0 for f in $FILES do...ction on each file. $f store current file name mkdir $ff $path/SatsumaSynteny -q $ref -t $f -o $ff...2333 days ago
Perl script to run SATSUMA in loop !
...use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to se...uery genome my $tarfile = "renamedAdinetaV2.fa"; #Ur target file my $satsumaLoc="/home/urbe/Tools/SATSUMA/...2142 days ago
