Tags: Bioinformatics, Computational Biology, Education, Sequence, Seq, Genome, View
3409 days ago
Tags: Bioinformatics, NGS, Assembly, de novo, Sequence, Assembler, Heterozygous
2908 days ago
Tags: Bioinformatics, NGS, Sequence, Andi, Evolution, Distance, Tool
2908 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignments, and then keeps only the parts that are orthologous, i.e. following the conserved order and orientation of features, such as protein coding genes, non-coding genes, or neutral sequences. Satsuma does no...Tags: Bioinformatics, NGS, Sequence, Alignment, Synteny, Comparative genomics, Genomics
2907 days ago
Tags: Bioinformatics, methylKit, Methylation, DNA, Analysis, Genome, NGS, Sequence
2886 days ago
Tags: Bioinformatics, Blobsplorer, Visualization, Assembled DNA, Sequence, contigs, Species, Pools.
2875 days ago
Tags: Bioinformatics, NGS, Sequence, Samtools, Primer, Tutorial
2866 days ago
Kraken: ultrafast metagenomic sequence classification using exact alignments
Kraken is an ultrafast and highly accurate program for assigning taxonomic labels to metagenomic DNA sequences. Previous programs designed for this task have been relatively slow and computationally expensive, forcing researchers to use faster abundance estimation programs, which only classify sm...Tags: Bioinformatics, Kraken, Metagenomic, Sequence, Classification, Alignments, NGS
2862 days ago
Tags: Bioinformatics, Kaiju, Metagenomic, Sequence, Classification, Alignments, NGS
2862 days ago
Tags: Bioinformatics, Ancient, EAGER, Genome, DNA, Sequence, NGS
2696 days ago