Results for "Single cell sequencing"
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Background. Next-generation sequencing technologies are...ltiple times the genome size in total reads from a single experiment. This is enough info...his way, it can very quickly, and at no additional sequencing cost, generate new, modified...2732 days ago
- EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses Whole Exome Sequencing (WES) data to identify CNVs....ication of CNVs in small as well as large-scale re-sequencing population and cancer studies...
2728 days ago
- SWALO (scaffolding with assembly likelihood optimization) is a method for scaffolding based on likelihood of genome assemblies computed using generative models for sequencing. Download Git repository of SWALO is at https://github.com/atifrahman/SWALO.
2728 days ago
- Bipype is a very useful program, which prepare a lot of types of bioinformatics analyses....he SA coordinates of the input reads and generates alignments in the SAM format given single-end...
2726 days ago
- Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads. Cutadapt helps with t...
2713 days ago
- fqtools is a software suite for fast processing of FASTQ files. Various file.... Most of the individual subcommands will take either a sing...ded. For subcommands that generate FASTQ data, either a single fil...
2719 days ago
- The automated reconstruction of genome sequences in ancient genome analysis is a multiface...r each step as well as new complementary tools tailored for ancient DNA data within a single int...
2717 days ago
BIMA V3: an aligner customized for mate pair library sequencing
Summary: Mate pair library sequencing is an effective and economical method for detecting genomic structura...ccurate than popular NGS alignment programs when processing mate pair sequencing. Availability: http://bioinfo...2713 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
Next Generation Sequencing has totally changed genomics: we are able to produce huge amounts of data at an incredibly low cost compared to Sanger sequencing. Despite this, some old probl...2708 days ago
GARM:Genome Assembly, Reconciliation and Merging
The pipeline is based mainly implemented using Perl scripts and modules and third-p...ges contigs or scaffolds from different assemblers using the same or different sequencing technologies. When scaffolds...2708 days ago
