Results for "Single molecule Sequencing"
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The MIRO (the miRNA omics) pipeline is a flexible and powe...erall short RNA) expression using short-read deep sequencing data. In its present implemen...the analysis of reads generated with the Illumina sequencing platform. MIRO allows to prep...2785 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharact...ical diversity present in a sample. The newest sequencing technologies have simultaneously made metagenomics easier, by making the sequencing process faster, and more diff...
2779 days ago
- Visualization has played an extremely important role in th...een found in the transcriptome previously, genome sequencing did not identify a direct chr...osomal fusion between these two genes. After SMRT sequencing, Ribbon shows that there are...
2768 days ago
- Background: Transcriptomics, metabolomics, metagenomics, and other various next-generation sequencing (-omics) fields are known for...
2768 days ago
- ART is a set of simulation tools to generate synthetic next-generation sequencing reads. ART simulates sequencing reads by mimicking real seque...rized from large recalibrated sequencing data. ART can also simulate r...or commercial next-generation sequencing platforms: Illumina's Solexa,...
2755 days ago
- HybPiper was designed for targeted sequence capture, in which DNA sequenci...e starts with high-throughput sequencing reads (for example from Illum...ative paralogs, and calculate sequencing depth. For more information,&...n separately for each sample (single or paired-end sequence reads). Wh...
2754 days ago
- Background. Next-generation sequencing technologies are no...tiple times the genome size in total reads from a single experiment. This is enough info...is way, it can very quickly, and at no additional sequencing cost, generate new, modified...
2733 days ago
- EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses Whole Exome Sequencing (WES) data to identify CNVs....cation of CNVs in small as well as large-scale re-sequencing population and cancer studies...
2728 days ago
- SWALO (scaffolding with assembly likelihood optimization) is a method for scaffolding based on likelihood of genome assemblies computed using generative models for sequencing. Download Git repository of SWALO is at https://github.com/atifrahman/SWALO.
2728 days ago
- Bipype is a very useful program, which prepare a lot of types of bioinformatics analyses. The...e SA coordinates of the input reads and generates alignments in the SAM format given single-end...
2727 days ago
