Results for "Software Architecture"
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The Sybil software package provides a primarily web-based front-end to comparative genome dat...owing sections provide some high-level technical details about the overall architecture and external dependencies of...2801 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "bake-off" as an attempt to produce a realistic assessment of genome assembly software in...2801 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA sequence data. To install DECIPHER, see the Downloads page. To begi...
2778 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of miRNA (or more generall sho...s using one of several algorithm. MIRO output is furthermore compatible with software suc...
2773 days ago
Entrez Direct: E-utilities on the UNIX Command Line
Entrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of interconnected databases (publicati...ned in structured XML format. This can eliminate the need for writing custom software to...2759 days ago
- Background: Transcriptomics, metabolomics, metagenomics, and other various next-generation sequencing (-omics) fiel...eatmaps. Results: We propose shinyheatmap: an advanced user-friendly heatmap software sui...
2757 days ago
- Beagle is a software package that performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Beagle versio...
2751 days ago
- Background. Next-generation sequencing technologies are now producing multiple times the...experiment. Our approach applies de novo assembly software to experimental reads and so-...CORD on both simulated and real data. We made our software pub...
2722 days ago
- Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute. It provides basic data structures for effi...
2719 days ago
- fqtools is a software suite for fast processing of FASTQ files. Various file manipulations are supported. See below for a full list of the subcommands avail...
2709 days ago
