Results for "Structural Bioinformatics"

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  • PBSuite: Software for Long-Read Sequencing Data from PacBio

    PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool Both are contained within the PBSuite c...tra-read discordance and soft-clipped tails of long reads to identify structural var...

    2638 days ago

  • MaxBin: software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm.

    MaxBin is software for binning assembled metagenomic sequences based on an Expectation...f each bin after the binning process is finished. https://academic.oup.com/bioinformatics/article/32/4/605/1744462/MaxB...

    2631 days ago

  • Pacbio Long Reads Compatible Software and Tools

    The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMRT&r...for PacBio data? Email us. Software categories: De novo assembly Structural Var...

    2622 days ago

  • Krona

    Krona allows hierarchical data to be explored with zooming, multi-layered pie charts....d using an Excel template or KronaTools, which includes support for several bioinformatics tools and raw data formats. T...

    2615 days ago

  • SNPGenie

    SNPGenie is a Perl script for estimating evolutionary parameters, mainly from pooled n...iles, and we take care of the rest! For the earlier version, see Hughes Lab Bioinformatics Resource.

    2607 days ago

  • Fools guide

    This website and accompaning documents are intended as a tool to help researchers deal...criptomic high-throughput sequencing data without having to learn extensive bioinformatics skills. It covers all steps f...

    2604 days ago

  • NGS teaching material

    High throughput sequencing (HTS) technologies are being applied to a wide range of imp...species using HTS. The course consists of a practical training module, HTS bioinformatics training, and lecturing/semin...

    2601 days ago

  • CABOG: Celera Assembler with Best Overlap Graph

    CABOG (Celera Assembler with Best Overlap Graph) is scientific software for DNA research. CABOG has been a critical component of many genome sequencing projects. CABOG...

    2561 days ago

  • ERGO 2.0 Bioinformatics suites

    ERGO 2.0 provides a systems biology informatics toolkit centered on comparative genomics to capture, query, and visualize sequenced genomes.  Using Igenbio's proprieta...

    2560 days ago

  • NCBI Prokaryotic Genome Annotation Pipeline

    NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and archaeal genomes (chromosomes and...n of protein-coding genes, as well as other functional genome units such as structural RNA...

    2560 days ago